Summary 2
PF04680 - Opioid growth factor receptor repeat
PF04680 Protein family information
Q05BV5
Q05BV5 Interpro sequence information
Sequence:
>Q05BV5 1-660
MRRTRRTRTARTARPPARGTRTQGTRTRSRRSRGRRGPARSRMTGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFY
RNEIRFLPNGCFIEDILQNWTDNYDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGF
YGIRLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEETLVRRELPGVRQSALDYF
MFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKG
GGRVDEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGC
ALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSE
NGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAKT
PSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKA
GEAAELQDAEVESSAKSGKP
MRF results:
TAPAS results:
PF04886 - PT repeat
PF04886 Protein family information
A0A0F6P044
A0A0F6P044 Interpro sequence information
Sequence:
>A0A0F6P044 1-358
VALLDNAIKCDEEVPIPDPPQSPDENPGGKDDPPGDSDPLPGEGAGAVEPAGGETDSGVEEGPAEQAVDQPLTQSTDQPA
DQPAEQPADQALTQPTDQPANQPVDQPTDQPIDQPTDQPVDQTTDQTTEQPAGEPLTQSTDEPVDQPLTQSTDQPAGEPL
THSTDQPADQPGDQSADQPQTTDQVTEQPTDQPTEQPTDQTTDQPTEQPTDEPLTQPTDEPLPQPIVEASDRAAAAAVKN
PNEIEAKCAQLKDQDGVKITGPCGAKFQVFLIPHVTINVETETNAIHLGKKLDDVVITKKMHKGVGGKSPPLLQFEEDAD
SLLNQCTEGKTFKFVVVVKGEELILKWKVYEKVPSPSD
MRF results:
TAPAS results:
PF05671 - GETHR pentapeptide repeat (5 copies)
PF05671 Protein family information
P91183
P91183 Interpro sequence information
Sequence:
>P91183 1-101
MFQNLLENSKKFWIVLEPSGKFLKMLLRDLRGETHRGETHHGETHRGEAHRGETHRGETHRGETRRGETHRGETRRGETQ
NFGGKFKFSVKNILAGNLNFL
MRF results:
TAPAS results:
PF06049 - Coagulation Factor V LSPD Repeat
PF06049 Protein family information
A0A833YAA7
A0A833YAA7 Interpro sequence information
Sequence:
>tr|A0A833YAA7|A0A833YAA7_9CHIR Coagulation factor V OS=Phyllostomus discolor OX=89673 GN=HJG60_004700 PE=3 SV=1
MRPRHGPSPEPGQAVSADLRHPSSPEDSGQMSPSLELEVWQTAISPDLTQTTLSPDLGQD
ALSPDFSQTTVSPDLGQTTLSPDPSQDALSPDLGQDALSPDFSQTTVSPDLDQETLSPDF
SQTTDSPDLTQTTLSPDLSQDALSPDFSQTTVSPDLDQETLSPDFSQTTDSPDLTQTTLS
PDLSQETLSPDLSQDALSPDFSQTTVSPDLGQTTLSPDPSQETVSPDLSQETDSPDLSQE
TLAPDLGQETLSPDLGQETISPDFSQTTDSPDLDQETLSPDLSQETLSPDLGQDALSPDF
SQTTVSLDLDQETLSPDFSQTTDSPGLGQETLSPDLGQTTLPPAVWQTSAPPDIDQTPDT
SEPAQTVPYSDLGQLSSLQPSPPLNDTFLTKEFNLPFVLGFSGDDGDYIEMIPSEREEND
EDDSYEFGHVAYDDPYQTDMRTDMNSSRNPDSIAEWYLRSNNGNRKYYYIAAEEISWDYS
KSAQSEMDSEDEDAVPEGTVYKKVVFRKYLDSTFTKRDPRGEYEEHLGILGPVIRAEVDD
VIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNRSYTYVWHATG
RSGPENPGSACRAWAYYSAVNTEKDIHSGLIGPLLICRKGTLHKESKMPVDTREFVLLFM
VFDEKKSWYYDKKPERSWRRTSSEVKHSHEFHAINGMVYNLPGLRMYEQEWVRLHLLNLG
GSRDIHVVHFHGQTLLENGTRQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTQVGENQRA
GMRTPFLIMDRECRMPMGLSTGVVADRQIKASEFVGSWEPKLARLNNGGSYNAWMTEKMS
EFDTQPWIQVDMEREVLFTGIQSQGAKHYLKSYYTTEFRVAYSSDQTNWQIFKGNSTRNV
MYFDGNSDASSIKENRFDPPIVARYIRVYPTRFFNRPALRLELQGCEINGCSTPLGVESR
KIEDKQITASSFKTSWWGGSWEPSLARLNAQGRVNAWQAKANNNRQWLQIDLLKVKKITA
IVTQGCKSLSSEMYVKSYTVHYSDGGVDWTPYRQRSSMVDKIFEGNSNFKGHVKNFFNPP
IISRYIRIIPKTWNQSIALRLELFGCDID
Sequence used for the model:
WQTAISPDLTQTTLSPDLGQDALSPDFSQTTVSPDLGQTTLSPDPSQDALSPDLGQDALS
PDFSQTTVSPDLDQETLSPDFSQTTDSPDLTQTTLSPDLSQDALSPDFSQTTVSPDLDQE
TLSPDFSQTTDSPDLTQTTLSPDLSQETLSPDLSQDALSPDFSQTTVSPDLGQTTLSPDP
SQETVSPDLSQETDSPDLSQETLAPDLGQETLSPDLGQETISPDFSQTTDSPDLDQETLS
PDLSQETLSPDLGQDALSPDFSQTTVSLDLDQETLSPDFSQTTDSPGLGQETLSPDLGQT
TLPPAVWQTSAPPDIDQTPDTSEPAQTVPYSDLGQLSSLQPSPPLNDTFLTKEFNLPFVL
MRF results:
TAPAS results:
Alphafold results - spectrum b
Alphafold results - units from MRF
PF06392 - Acid shock protein repeat
PF06392 Protein family information
A0A0A3YPY8
A0A0A3YPY8 Interpro sequence information
Sequence:
>tr|A0A0A3YPY8|A0A0A3YPY8_9GAMM Acid shock protein OS=Erwinia typographi OX=371042 GN=asr PE=3 SV=1
MKKLFALVVAAAMGLSSVAFAADTTAAPATTPAATTAAPAKATTTKHHKKHKKATVQKAQ
AAKKVHHKKVAKKPVAQKAQAAKKVHHKKVAKKPVAQKAQAAKKVHHKKVAKKPVAQIAQ
AAKKVHHKKVAKKPVAQKAQAAKKVHHKKVTKKAAAPKA
Sequence Fragment:
HHKKHKKATVQKAQAAKKVHHKKVAKKPVAQKAQAAKKVHHKKVAKKPVAQKAQAAKKVH
HKKVAKKPVAQIAQAAKKVHHKKVAKKPVAQKAQAAKKVHHKKVTKKAAAPKA
MRF results:
Region 1: 51-150 , 20 aa length, 5 units
HKKATVQKAQAAKKVHHKKV
AKKPVAQKAQAAKKVHHKKV
AKKPVAQKAQAAKKVHHKKV
AKKPVAQIAQAAKKVHHKKV
AKKPVAQKAQAAKKVHHKKV
Region 2: 24-39, 6 aa length, 3 units
TTAAPA
TTPAA-
TTAAP-
TAPAS results:
Alphafold results - spectrum b
Alphafold results - units from MRF
PF06671 - Repeat of unknown function (DUF1174)
PF06671 Protein family information
This family do not have alpha models
A0A8R1DRW7
A0A8R1DRW7 Interpro sequence information
Sequence:
>A0A8R1DRW7 1-1421
MKPRWLSSSSPTTSQLLLLSSILLLANAKPLNLPQTITCADNIYVYVNETQADRSPYIFVEIKTETIHDCIDACFGNQFC
YSLKFDQSKTDSCSLYYFAAYNCTGHELRPAKSVTYNGGAVTIDCLRCPSNGDFVTAPPFSSFTEQTIQAIGLRGETLSE
KPLVEEITHNIDSKLESTTTTAAPTSGHSTATVDLHVQDTTPTSESPETTTVPVEPVTSTETAVTQAAQEGSKGNYYPAC
YINFQVEDISTQPNFEHYSVKPAKSANACARFCFVGLCTVAVYSPSRRECLLGKERTEQCTEADNKFSYSGTQDVVLQCF
RCSSRKLPPVTKPPVSFQKEEEVTTQATVDESTTTTEATTTTTNLKSETSTSQNESATTEKPEEPTVLTTDAVESATVAE
ANDPEPAIATKVEMAKDKEGVKTTQRKHCVIKFQARPLSQRPENLQAKFELNVPVDSIELCATRCYQDGCSGARFDPTDK
SCTLSYDDPQFCARGNVFIHYEANETTWLHCVNCYTVKPSDIDEARTGTTSAPHLTTNEETTTPAQSSETTTVVTTESSS
AIPSSEEPTTTIATSTVKASEPDSDFQKGCLIKFQARPLSERPKEFSAKFETEIKVESVEVCATRCYQDGCSGARFDPVW
STCSLSYDEKHFCARGDVFLQYMAKEVTWIHCVNCYAIKPSVAADVSKVPNKLNNENQVTTTTTAGPATNAWGEEISTTS
STNQKEEKTATIEPSAEESTTIMTIGQEVEDDSLLKGCIVHFQAQPIEQRSAEFTAPFELNLNVPTTETCAHRCYQDGCT
AARYDPETKKCSLAYEDKPFCGKGKLVNVDRSKSTVWIHCLSCVPLNHAKVAENTDENITEFPSGQEIPTTLSAETEGSG
EETAVPSTTTPAEASKDGEVTEASGEETTTTAVTEASGEETTTAAVTEGSGEDAAVSSTTAPAEASKDGEVTEASGEETT
TTAVTEASGEETTTAAVTEGSGEEIAVPTTTAPAEASKDGEVTEASGEETTNAAVTEGSGEDAAVSSTTAAAEASKDGEV
TEASGEETTTASVTEASGEESTTAAVTEGSGEDAAVSSTTAPAEASKDGQVTEASGEETTTTAVTEASGEETTTAAVTEG
SGEDAAVSSTTAAAEASKDGQVTEASGEETTTTAVTEASGEETTTAAVTEGSGEDGAVSSTTAAAEASKDGEVTEASGEE
TTTTAVTEASGEETTTAAVTEGSGEDAAVSSTTAPAEASKDGQVTEASGEETTTTAVTEASGEETTTAVVTEGSGEDAAV
SSTTAPAEASKDGEVTEASGEETTTTSVTEASGEETTTAAVTEGSGEDAAVSSTTAPVEASKDGQVTEASGEETTTTSVT
EASGEETTTAADTEGSGEDAAVSSTTAPTEASKDGEVTEASGEETTTTSVTEASGEETTTA
MRF results:
TAPAS results:
PF06740 - RMicrotubule associated protein Futsch
PF06740 Protein family information
This family do not have alpha models for the long sequences that present many of these repeats, and only generates a model for the smaller sequences that have one or two repetitions of this type
B4R2P4
B4R2P4 Interpro sequence information
Sequence:
>B4R2P4 1-886
MSDEGGQKPHHSPHLRRHHHRHYRGALRVVAKVAGKVAPTRGNCASGDAALEAVETIKLDNSNPLDTPCVLESMSVPGSP
GIAYISGSTSDPSAIRERLIQYASENLVTEVLIHPQYNTLIQCMRNLLSSFTRHRHIIHAGYTFSGNGSWILHVDTEASR
PESVVDSVKDEAEKQESPQYIKDDKSTEHSRRESLADKSAVPSEKFVSRPVSVASDHEAAEAIEDDAKSSISPKDKSRPG
SVAETVSSPIEEAPIEFSKIEVVEKSNLALSLQAGSGGKLQTDSSPVDVAEGDFSHVVASVSTVTPTLTKPAELAKIGAA
ITVSSPVDEAPRTPSAPEHISRADSPAEYASEEIASQDKSPQVSKESSRPASVTESKDDAAQLKRSVEDLRSPVASTEIS
RPASVGETASSPIEEAPKDFAEFEQSVKAMLPLTIELKGSLPTLSSPVDVAHGDFPPTSTTSSPTAAAVQPAELSKVDIE
KTASSPIDEAPKSVLGSPAEERPESPAESAKDAAESVEKSKDASRPPSVVESTKADSTKGDISPSPESVLEGPKDDVEKS
RESSRPPSVSASITGDSTKDVSRPASVVESVRDEHDKAESRRDTSSATKDDSLKETVAEFLATEKIVSAKEAFSTEATKS
ADDCLKKATASTVSSTTASQRALFVGTDESRRESLLSQASESRLTHSDPEDEEPADDVDERSSVKESRSKSIATIMMTSI
YKPSEDMEPISKLVEEEHEHVEELTQEVTSTSKTTTLLQSSEQSSSTTTSSTTKTGASRVESITLTQMDQQTSQSQAEPA
DRKTPPTAPVSPGVKAMSSTGSAGSVIGAGAVAAGGKCESSAASIVSSSGPMSPKDISGKSSPGALTSESQSIPTPLGRE
SHTDTP
MRF results:
TAPAS results:
