PF00399 - Yeast PIR protein repeat

PF00399 Protein family information

G2YIK9_BOTF4

Repeat Units annotated 196-213, 260-277 …

G2YIK9_BOTF4 Interpro sequence information

Sequence:

>tr|G2YIK9|G2YIK9_BOTF4 Covalently-linked cell wall protein OS=Botryotinia fuckeliana (strain T4) OX=999810 GN=BofuT4_P018520.1 PE=4 SV=1
MKTTLVVVAGLVSVASAQVTALITPTASAPDGCATSYSGAFQISTVNVSSVAKRQQKRAD
CSSSLAVTLSDGILKDQQDRTGYIASNTQFQFDGPPQTGAIYTGGWSVCSNGSLALGSSS
VFYQCLSGTFNNLYTESQGEQCSQILIQTSACSSAAGSGVIGQSTDGQATATAIASLSSA
AISQISDGQPQGATSAATISQISDGQVQAPTSAAGAPITQISDGQVQGATSVAPSPTGAP
ISQITDGQIQGATSAAAISSAVVSQIPDGQIQAPTSAAAPSAVVSQIPDGQIQAPTSAAA
PSAVVSQIPDGQIQAPTSAAAPSAVVSQIPDGQIQAPTSAAAPSAVVSQIPDGQIQAPTS
AAAPSAVVSQIPDGQIQAPTSAATLETSTSLAGAVISQISDGQVQAPTATPTNGTYSSIT
SAPVDFTGAANSYQISGSLAAAAIGLFAAIL

MRF results:

Region 1: 211-400, 23 aa length, 9 units
TSAA----GAPITQISDGQVQGA
TSVAPSPTGAPISQITDGQIQGA
TSAAAI-SSAVVSQIPDGQIQAP
TSAAA--PSAVVSQIPDGQIQAP
TSAAA--PSAVVSQIPDGQIQAP
TSAAA--PSAVVSQIPDGQIQAP
TSAAA--PSAVVSQIPDGQIQAP
TSAAA--PSAVVSQIPDGQIQAP
TSAATLETSTSLAGAVISQIS--

Region 2: 169-176, 2 aa length, 4 units
AT
AT
AI
AS

TAPAS results:

tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,85,88
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,193,202
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,208,250
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,269,355
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,361,383
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,disordered region,IUPred,402,418
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,180,196,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,196,213,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,239,255,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,261,277,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,282,298,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,303,319,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,324,340,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,345,361,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,366,382,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,functional domain,PFAM,394,410,PF00399.20
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,consensus ordered region,TAPASS,1,192
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,consensus ordered region,TAPASS,305,451
tr_G2YIK9GN=BofuT4_P018520.1_PE=4_SV=1,consensus disordered region,TAPASS,193,304

Alphafold results - spectrum b

_images/G2YIK9_alphaFold.png

Alphafold results - units from MRF

_images/G2YIK9_alphaFoldUnits.png

AlphaFold results G2YIK9_BOTF4

K1XX71_MARBU

Repeat Units annotated 182-198 …

K1XX71_MARBU Interpro sequence information

Sequence:

>tr|K1XX71|K1XX71_MARBU Covalently-linked cell wall protein OS=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) OX=1072389 GN=MBM_04240 PE=4 SV=1
MQTVLALTALAAVAFAGVAPHVARTVPAGCSTNYDGKFQVTILNGSSVVTKRELAKRASS
DTCGQPGLLTSTLKDGILTDSEGRIGNIVSNRQFQYDPAPGQTGAVYTDGFSICSNGSLA
SKAGSTVFYSCKSGDFANLYDQSIAPYCLPVFIDVMPCGTSSPGATVSQQKDGQPTATGS
VAPVTQITDGQAQVPTSVPPVTQINDGQVQAPTKAPPAPPAVTQITDGQLQVPTAGIPVT
QISDGQVQVPTAVTSQRLPAVSQIPDGQLQSNVSTNATKPPMPISSSGNGLMAGSFMTLV
MVVAAMLFL

MRF results:

Region 1: 160-274, 30 aa length, 6 units
TSS-----PGAT----VSQQKDGQPT--AT
GSV-----A--P----VTQITDGQAQ--VP
TSV-----P--P----VTQINDGQVQ--AP
TKA-----P--PAPPAVTQITDGQLQ--VP
TAG-----I--P----VTQISDGQVQ--VP
TAVTSQRLP--A----VSQIPDGQLQSNVS

TAPAS results:

tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,disordered region,IUPred,89,93
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,disordered region,IUPred,162,237
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,disordered region,IUPred,243,288
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,disordered region,BISMMpredictor,166,181
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,disordered region,BISMMpredictor,262,283
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,functional domain,PFAM,182,198,PF00399.20
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,functional domain,PFAM,200,215,PF00399.20
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,functional domain,PFAM,221,235,PF00399.20
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,functional domain,PFAM,238,253,PF00399.20
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,consensus ordered region,TAPASS,1,161
tr_K1XX71_K1XX71_MARBU=1072389_GN=MBM_04240_PE=4_SV=1,consensus disordered region,TAPASS,162,309

Alphafold results - spectrum b

_images/K1XX71alphafold.png

Alphafold results - units from MRF

_images/K1XX71alphafoldUnits.png

AlphaFold results K1XX71_MARBU

A0A0N0NR21

Repeat Units annotated 930-945

A0A0N0NR21 Interpro sequence information

Sequence:

>tr|A0A0N0NR21|A0A0N0NR21_9EURO Beta-glucosidase OS=Phialophora attinorum OX=1664694 GN=AB675_8716 PE=3 SV=1
MGKNLCATIGLLGLALTSTVSALPSDFELSKALDKRQQQQPFNSDYDGPILESPPSYPSP
WSNGVGDWAVAHQKAVAFVSQLTLAEKVNLTTGTGWTSDRCVGNTGAIPRLGFHQLCMQD
GPLGLRFADRVSAFPAGINVAATWNRELALERGAAMGAEAAGKGVDVQLGPAIGPLGRFP
NGGRNWEGFSPEPYLAGQIVAETVKGIQSSGVVATTKHYIANEQEHFRQVGESTGRGYDI
TETLSSNIDDKTMHELYLWPFADAVKAGTGSIMCSYQQVNNSYACANSYVLNHLLKNELG
FQGFIMSDWAAQHSGMSSAAAGLDMTMPGDTLFNTGYTFWGTNLTVGVLNGTLPQWRLDD
MAVRIMSAYYFVGHDEVYTDTNFNSWGYTAFGHIHPIDPNSPIGLVNEFVNVQDDHRSVI
RRIGQQSTVLLKNSGVLPLTGKEQQVGIFGYDACSNPAGPNGCDNRGCNNGTLAMGYGSG
TAEFPYLVTPQEAIETYILSNTDGVVQTICQNNADTQIQKLASTIDTALIFVNAHAGEGF
IDIDGNVGDRNNLSVWENGDRLIGNVTTYSNNTVIVIHSVGAVNVTAWYDNPNVTAIIWA
GLPGQESGNALVDVLYGAVSPGGKLPFTIGRNFDDYGPAKIIFEPNNGQFGAPQDDFSTT
GVFIDYRHFDQEGIDPIYEFGFGLSYTTFEFSDLVITPRNPAPYVPGGGLTQPAPTYGNV
SSNVDEVIYPAEIDYYYLYIYPYLNSSDLEASANDPEYGEPSENYLPAGYDDASPQPVLP
AGGAPGGNPGLWEVVATVQALVTNTGSVAGDEVAQVYIGLGDGEPPKVLRGFERLTIPAG
GSVTFTAELTRKDVSVWDVVTQNWVEVESPVVYVGSSSRKTPLQGTLTSGSGGSPPAGGN
ETSIIPYPPTYPGSQTGSWGSWGASTVVPTVTQISDGQPQAPTHT

MRF results:

Region 1: 10-882, 368 aa length, 3 units

GLLGLALTSTVSALPSDFELSKA-LDKRQ----QQQP--FNSDYD----GP-ILESPP---SY--PSPWSNGVGDWAVA-HQKAV-AF--VSQLTLAEKVNLTTGTGWTSDRCVGNTGAIPRLG-----FHQLCMQDGPL----GL-----RFADRVSAFPAGIN--VAATWNRELAL--ERGA--AMGAE-AAG----K----GV-DVQLGPAIGPLG---RFPNGGRNWEGF---SPE-PYL-AGQIVAETVKGI-QSSGVVATTKHYIANEQ-EHFRQ--------VGESTGRGYDITETLSSNIDDKTMHELYLWPFADAVKAGTGS-IMCSYQQVNNSYACANSY-VLN-HLLKNEL
GFQGF-IMSDWAAQHSGMSSAAAGLDMTM----PGDTL-FNTGYTF--WGT-NLTVGVLNGTL--PQ-WR--LDDMAVR-IMSAY-YF--VGHDEVYTDTNFNS---W------GYTA----FGH----IHPI-DPNSPI----GLVN---EFVNVQDDHRSVIR--RIGQQSTVLLK--NSGVLPLTGKEQQVG----IF---GY-DACSNPA-GPNGCDNRGCNNGTLAMGYGSGTAEFPYLVTPQEAIETYILS-NTDGVVQTICQNNADTQIQKLASTIDTALIFVNAHAGEGF-I--DIDGNVGDR--NNLSVWENGDRL---IGN-V-TTYS--NNTVIVIHSVGAVNVTAWYDNP
NVTAI-IWA---GLP-GQESGNALVDVLYGAVSPGGKLPFTIGRNFDDYGPAKIIFEPNNGQFGAPQ------DDFSTTGVFIDYRHFDQEGIDPIYE-FGF-G---L------SYTT----FEFSDLVITPR-NP-APYVPGGGLTQPAPTYGNVSSNVDEVIYPAEIDYYYLYIYPYLNSSDLEASANDPEYGEPSENYLPAGYDDASPQPV-LPAG--------G--APGGNPGLWE---VVATVQALVTNTGSVAGDEVAQ-VYIGLGDGEPPKVLRGFERLTI----PAG-GS-V--TFTAEL-TR--KDVSVW---DVV---TQNWV-EVES--P----VVY-VGSSS----RKTP

Region 2: 737-744, 2 aa length, 4 units

YL
YI
YP
YL

TAPAS results:

tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,IUPred,38,57
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,IUPred,705,712
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,IUPred,751,783
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,IUPred,829,833
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,IUPred,882,945
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,33,50
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,51,67
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,89,107
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,239,255
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,452,473
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,874,904
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,disordered region,BISMMpredictor,906,921
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,functional domain,PFAM,126,367,PF00933.22
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,functional domain,PFAM,428,686,PF01915.23
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,functional domain,PFAM,812,878,PF14310.7
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,functional domain,PFAM,931,945,PF00399.20
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,consensus ordered region,TAPASS,1,22
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,consensus ordered region,TAPASS,53,889
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,consensus disordered region,TAPASS,23,52
tr_A0A0N0NR21_OX=1664694_GN=AB675_8716_PE=3_SV=1,consensus disordered region,TAPASS,890,945
_images/A0A0N0NR21tapass.jpg

Alphafold results - spectrum b

_images/A0A0N0NR21alphafold.png

Alphafold results - units from MRF

_images/A0A0N0NR21alphafoldUnits.png

Alphafold results - region evaluated in MRF

_images/A0A0N0NR21alphafoldregion.png

Superimposed unit fragments A0A0N0NR21

AlphaFold results A0A0N0NR21