PF00402 - Calponin family repeat

PF00402 Protein family information

F6Y516_CIOIN

Repeat Units annotated 139-163 ,179-203

F6Y516_CIOIN Interpro sequence information

Sequence:

>tr|F6Y516|F6Y516_CIOIN Calponin-homology (CH) domain-containing protein OS=Ciona intestinalis OX=7719 PE=3 SV=2
STSTMANRPKAYGNSAEVASKIDAKYSQEDEMEIVAWISSLVQSSPEGKGKEAMKQNKEM
ENISVFLKAAAKYANIPAQDMFQTVDLYEGGNLGQVQSTIFKVGAEAKNRGLHGIGVKKA
EENKRVFDEQKMREGRNIIGLQMGTNQGASQSGMSAYGLGRQMTQKKAGICKPNPTYTGS
MQMGTNQVASQRGMTAYGLGRQLTPQK

MRF results:

Region 1: 1-207, 56 aa length, 5 units
S-TSTMANRPKAYGNSA--E--VASKIDA--KYSQE------D-EM-EIVAWIS--
---SLVQSSPEGKGKEAMKQNKEMENISVFLKAAAKYANIPAQ-DMFQTVDLYEGG
N-LGQVQSTIFKVGAEA--KNRGLHGIGV--KKAEEN-----K-RVFDEQKMREGR
NIIGLQMGT--NQGASQ--SGMSAYGLGR--QMTQK------KAGICKPNPTYTG-
---SMQMGT--NQVASQ--RGMTAYGLGR--QLTPQ------K-------------

TAPAS results:

tr_F6Y516_OX=7719_PE=3_SV=2,structured domain,CATH,45,139,1.10.418.10/FF/4730
tr_F6Y516_OX=7719_PE=3_SV=2,disordered region,IUPred,1,10
tr_F6Y516_OX=7719_PE=3_SV=2,disordered region,IUPred,46,57
tr_F6Y516_OX=7719_PE=3_SV=2,disordered region,IUPred,112,145
tr_F6Y516_OX=7719_PE=3_SV=2,disordered region,IUPred,150,158
tr_F6Y516_OX=7719_PE=3_SV=2,disordered region,IUPred,168,207
tr_F6Y516_OX=7719_PE=3_SV=2,functional domain,PFAM,49,103,PF00307.32
tr_F6Y516_OX=7719_PE=3_SV=2,functional domain,PFAM,139,162,PF00402.19
tr_F6Y516_OX=7719_PE=3_SV=2,functional domain,PFAM,180,202,PF00402.19
tr_F6Y516_OX=7719_PE=3_SV=2,consensus ordered region,TAPASS,1,139
tr_F6Y516_OX=7719_PE=3_SV=2,consensus disordered region,TAPASS,140,207

Alphafold results - spectrum b

_images/F6Y516alphafold.png

Alphafold results - units from MRF

_images/F6Y516alphafoldUnits.png

Alphafold results F6Y516_CIOIN

K1R832

Repeat Units annotated : 52-76, 92-116, 132-156 , 181-196, 266-289, 305-328, 344-367, 383-406, 422-445, 461-484, 500-523

K1R832 Interpro sequence information

Sequence:

>tr|K1R832|K1R832_CRAGI Protein unc-87 OS=Crassostrea gigas OX=29159 GN=CGI_10025379 PE=3 SV=1
MLTLSERSRIDGTIIRKAQRNGFQGETAGNKPVEKNVRDFSYAQLKSGHGTVGLQAGTNK
LDSQKGMTAMGAVRHISDIRADKFDKTSEGVITLQAGTNQWASQKGMTAIGAVRHISDLK
VSQACQEGQATISLQSGTNKFDSQKGTRGFGAVRHISDIRADDLLLEGTDKISPVISYTG
GDSQKGMRGFGAQRHVSDIKITDLAEEYCKKTGFKPPKPVIQSETTEQTPVAQRNSFNGP
VIGSKPTEKHIVHFTEEQKRAGHGIIGLQAGTNKCASQKGMKIGAARHIADIKADDLDRA
GQGIIGAQAGTNQYASQKGMKIGGVRHIADIRADEMSQEGQGIVGAQAGTNKFASQSGMS
FGAVRHIADIRADTASQEGQGVIGLQSGSNKGASQSGMSFGGRRHVSDIRVDDMSQDSQG
IVGGQSGTNKFANQSGMSFGAVRHIADIRADDLDQQGQGTVGLQSGSNKFASQSGMSFGS
VRHVADIRADQYSQEGAGTIGLQYGSNQGASQAGMNFGKGRGVADIPIQDLAESMGYTQY

MRF results:

Region 1: 54-172, 40 aa length, 3 units
LQAGTNKLDSQKGMTAMGAVRHISDIRADKFDKTSEGVIT
LQAGTNQWASQKGMTAIGAVRHISDLKVSQACQEGQATIS
LQSGTNKFDSQKGTRGFGAVRHISDIRADDLLLEGTDKI-

Region 2: 264-535, 39 aa length, 7 units
GIIGLQAGTNKCASQKGMKIGAARHIADIKADDLDRAGQ
GIIGAQAGTNQYASQKGMKIGGVRHIADIRADEMSQEGQ
GIVGAQAGTNKFASQSGMSFGAVRHIADIRADTASQEGQ
GVIGLQSGSNKGASQSGMSFGGRRHVSDIRVDDMSQDSQ
GIVGGQSGTNKFANQSGMSFGAVRHIADIRADDLDQQGQ
GTVGLQSGSNKFASQSGMSFGSVRHVADIRADQYSQEGA
GTIGLQYGSNQGASQAGMNFGKGRGVADIPIQDLA-ESM

TAPAS results:

tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,structured domain,CATH,12,52,1.10.418.10/FF/4730
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,structured domain,CATH,225,266,1.10.418.10/FF/4730
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,structured domain,CATH,433,484,2.40.50.140/FF/37133
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,15,40
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,53,67
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,132,147
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,186,192
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,215,256
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,265,269
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,300,319
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,325,349
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,366,370
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,378,429
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,448,468
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,498,501
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,IUPred,513,516
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,BISMMpredictor,16,39
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,BISMMpredictor,133,151
tr_K1R832_OX=29159_GN=CGI_10025379_PE=3_SV=1,disordered region,BISMMpredictor,384,399

Alphafold results - spectrum b

_images/K1R832alphafold.png

Alphafold results - units from MRF

_images/K1R832alphafoldUnits.png

Alphafold results K1R832