PF12778 - PXPV repeat (3 copies)

PF12778 Protein family information

A0A4Q5PGS7

A0A4Q5PGS7 Interpro sequence information

Sequence:

>tr|A0A4Q5PGS7|A0A4Q5PGS7_9BURK Signal peptide protein OS=Comamonadaceae bacterium OX=1871071 GN=EOO28_18705 PE=4 SV=1
MKTLTSLIARNTLRAATLAAIAVAAFAGASSAQARDNVQLSINVGNPGYVQPAPVYVQPR
PVYVQPRPVYVQPRPVYVQPAPVYVQRNGAWGDRDRDGVPNIYDRNDRRHPHHGHRDWSR
GPNGDADRDGVPNRFDRFPSNPNYR

MRF results:

Region 1: 49-90, 7 aa length, 6 units, T-REKS 1.0
YVQPAPV
YVQPRPV
YVQPRPV
YVQPRPV
YVQPAPV
YVQRNGA

TAPAS results:

tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,structured domain,CATH,1,79,3.40.50.880/FF/18841
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,structured domain,CATH,110,144,4.10.1080.10/FF/2874
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,peptide signal,SignalP,1,34
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,disordered region,IUPred,35,145
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,disordered region,BISMMpredictor,105,141
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,functional domain,PFAM,47,64,PF12778.8
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,functional domain,PFAM,66,85,PF12778.8
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,consensus ordered region,TAPASS,1,79
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,consensus ordered region,TAPASS,111,149
tr_A0A4Q5PGS7OX=1871071_GN=EOO28_18705_PE=4_SV=1,consensus disordered region,TAPASS,80,110

Alphafold results - spectrum b

_images/A0A4Q5PGS7alphafold.png

Alphafold results - units from MRF

_images/A0A4Q5PGS7alphafoldUnits.png

AlphaFold results A0A4Q5PGS7

A0A7S7PTV7

A0A7S7PTV7 Interpro sequence information

Sequence:

>tr|A0A7S7PTV7|A0A7S7PTV7_9BRAD PXPV repeat-containing protein OS=Bradyrhizobium sp. CCBAU 51765 OX=1325102 GN=XH96_16775 PE=4 SV=1
MKYLFAAVMLASAAVGFSEAASAAGGCGPGWYRGPYGGCRPMRGPVVVRPAPVVVAPAPV
VVVPRARVCPYGFRWYAGRCRPF

MRF results:

Region 1: 45-67, 9 aa length, 3 units, T-REKS 0.74
PVVVRPA--
PVVVAPA--
PVVVVPRAR

TAPAS results:

tr_A0A7S7PTV7_OX=1325102_GN=XH96_16775_PE=4_SV=1,peptide signal,SignalP,1,20
tr_A0A7S7PTV7_OX=1325102_GN=XH96_16775_PE=4_SV=1,functional domain,PFAM,44,62,PF12778.8
tr_A0A7S7PTV7_OX=1325102_GN=XH96_16775_PE=4_SV=1,consensus ordered region,TAPASS,1,85

Alphafold results - spectrum b

_images/A0A7S7PTV7alphafold.png

Alphafold results - units from MRF

_images/A0A7S7PTV7alphafoldUnits.png

AlphaFold results A0A7S7PTV7