PF00904 - Involucrin repeat

PF00904 Protein family information

A0A6J3GT35

PFAM repeat regions: 156-165,166-174,176-185,186-195, 196-205,215-224,225-234, 245…377

A0A6J3GT35 Interpro sequence information

Sequence:

>tr|A0A6J3GT35|A0A6J3GT35_SAPAP Involucrin OS=Sapajus apella OX=9515 GN=IVL PE=3 SV=1
MSQQHTLPVTLPPALSQELLNTVPPPINTQQEQREQPAPLPPPCQKVPVELPVEGSSKHE
EKHVAIVKGVPEHECEQQQQAQGQERQQQHWGQDKEHQKAGNPEQQLKQEEAQRETQQLQ
GQLEEEKKLLDQQLDQELAKRDEQLGTKKKQLLEFPEQQEGQLKHLEQQEKPLELPEQQE
GQLKHLEEQKGQLKHLEHQEGQLELPEQVDQPKHLEQLEKQLEHPEQQEGQLKQQEEEQE
QLKHLEQQEEQLKHLEQQEGHLEHLEQQEGELKHLEQCKGQLEHLEQQEGQLELPEQQVG
QSKHLEQEEKRLEHLEQQEGQLKHLGKQEAQLELPEQVGQPKHLEQQEKQLEHPEQQEEQ
QEGQLKDLEQQERQLEQPVFAPAPGQAQDIQQALPSKSEVLLPVDQQQQKQEVQWQQK

MRF results:

Region 1: 177-207, 11 aa length, 3 units, T-REKS      0.83
EQQEGQLKHLE
-EQKGQLKHLE
-HQEGQLELPE

Region 2: 250-323, 10 aa length, 8 units, T-REKS 0.85
EQ----LKHL
EQQEGHLEHL
EQQEGELKHL
EQCKGQLEHL
EQQEGQLELP
EQQVGQSKHL
EQEEKRLEHL
EQQEGQLK--

Region 3: 149-248, 21 aa length, 5 units, TRUST 0.9
KKQLLEFPEQQEGQLKHLEQQ
EKP-LELPEQQEGQLKHLEEQ
KGQ-LKHLEHQEGQLE-LPEQ
VDQ-PKHLEQLEKQLEHPEQQ
EGQ-LKQQEEEQEQLKHLEQQ

TAPAS results:

tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,IUPred,1,406
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,BISMMpredictor,21,39
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,BISMMpredictor,70,133
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,BISMMpredictor,222,252
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,BISMMpredictor,301,324
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,disordered region,BISMMpredictor,343,379
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,functional domain,PFAM,1,69,PF10583.10
tr_A0A6J3GT35=Sapajus_apella_OX=9515_GN=IVL_PE=3_SV=1,consensus disordered region,TAPASS,1,430

Alphafold results - spectrum b

_images/A0A6J3GT35alphafold.png

Alphafold results - units from MRF

_images/A0A6J3GT35alphafoldUnits.png

AlphaFold results A0A6J3GT35

P14708

PFAM Repeat region: 156-165, 166-175 ….., 783-792

P14708 Interpro sequence information

Sequence:

>sp|P14708|INVO_PONPY Involucrin OS=Pongo pygmaeus OX=9600 GN=IVL PE=2 SV=1
MSQQHTLPVTLSPALSQELLKTVPPPVNTQQEQMKQPTPLPPPCQKVPVELPVEVPSKQE
EKHMTAVKGLPEQECEQQQQEPQEQELQQQHWEQHEEHQKAENPEQQLKQEKAQRDQQLN
EQLEEEKKLLDQRLDQELVKRDEQLGMKKEQLLELPEQQEQHLKHLEQQEGQLELPEQQE
GQLKHLEQQEGQLKHLEQQEGQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLKHLDQQE
GQLKHLDQQEGQLKHLDQQEGQLKHLDQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHEE
GQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQK
GQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQE
GQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLKHLDQQEKQLELPEQQVGQLKHLEQQE
GQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQE
GQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLKHLDQQEKQLELPEQQVGQLKHLEQQE
GQLEHLEGQEGQLEHLEHQEGQLGLPEQQVWQLKQLEKQEGQPKNLEEEEGQLKHLVQQE
GQLEQQEGQVEHLEEQVGQLKHLEEQEGQLKYLEQQQGQLEVPEQQVGQPKHLEQEEKQL
ELPEQQEGQLKHLEKQEAQLELPEQQVGQPKHLEQQEKQLEHPEQKDGQLKHLEQQEGQL
KNLEQQKGQLEQPVFAPAPGQVQDIQPALPTKGEVLLPVEQQQQKQEVQWPPKHK

MRF results:

Region 1: 703-780, 20 aa length, 4 units, 1.0 tally,Treks
PEQQVGQPKHLEQEEKQLEL
PEQQEGQLKHLEKQEAQLEL
PEQQVGQPKHLEQQEKQLEH
PEQKDGQLKHLEQQEGQL--

Region 2: 167-643, 17 aa length, 47 units, 0.94 tally,Treks
EQQEGQLELP-------
EQQEGQLKHL-------
EQQEGQLKHL-------
EQQEGQLEVPE------
-EQVGQLKYLEQQ----
---EGQLKHLDQQEG--
-----QLKHLDQQEG--
-----QLKHLDQQEG--
-----QLKHLDQQEG--
-----QLKHLDQQEG--
-----QLELPEQQEG--
-----QLKHLEQQEG--
-----QLKHLEHEEG--
-----QLEVPEEQVG--
-----QLKYLEQQEG--
-----QLKHLDQQEG--
-----QLELPEQQEG--
-----QLKHLEQQEG--
-----QLKHLEHQKG--
-----QLEVPEEQVG--
-----QLKYLEQQEG--
-----QLKHLDQQEG--
-----QLELPEQQEG--
-----QLKHLEQQEG--
-----QLKHLEHQEG--
-----QLEVPEEQVG--
-----QLKYLEQQEG--
-----QLKHLDQQEG--
-----QLKHLDQQEK--
-----QLELPEQQVG--
-----QLKHLEQQEG--
-----QLEVPEEQVG--
-----QLKYLEQQEG--
-----QLKHLDQQEG--
-----QLELPEQQEG--
-----QLKHLEQQEG--
-----QLKHLEHQEG--
-----QLEVPEEQVG--
-----QLKYLEQQEG--
-----QLKHLDQQEG--
-----QLKHLDQQEK--
-----QLELPEQQVG--
-----QLKHLEQQEG--
-----QLEHLEGQEG--
-----QLEHLEHQEG--
-----QLGLPEQQVW--
-----QLKQLEKQEGQP


Region 2: 658-694, 20 aa length, 2 units, 0.77 tally,TRUST
QQEGQL---EQQEGQVEHLE
EQVGQLKHLEEQEGQLKYLE

TAPAS results:

sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,structured domain,CATH,82,308,3.80.10.10/FF/106867
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,structured domain,CATH,398,551,3.80.10.10/FF/106867
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,IUPred,1,624
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,IUPred,632,835
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,21,48
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,70,133
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,654,675
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,677,694
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,723,756
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,disordered region,BISMMpredictor,765,820
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,functional domain,PFAM,1,69,PF10583.10
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,consensus ordered region,TAPASS,83,308
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,consensus ordered region,TAPASS,399,551
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,consensus disordered region,TAPASS,1,82
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,consensus disordered region,TAPASS,309,398
sp_P14708_OX=9600_GN=IVL_PE=2_SV=1,consensus disordered region,TAPASS,552,861

Alphafold results - spectrum b

_images/P14708alphafold.png

Alphafold results - units from MRF

_images/P14708alphafoldUnits.png

AlphaFold results P14708